dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002353_1|CGC34
Gene ID: MGYG000002353_02341
Location and strand information: 2380677 - 2382077 (+)
Family: 2.A.1.1.116
Protein type: TC
Protein description: D-xylose transporter

Gene clsuter ID: MGYG000002353_1|CGC34
Gene ID: MGYG000002353_02342
Location and strand information: 2382329 - 2383408 (-)
Family: GntR
Protein type: TF
Protein description: Arabinose metabolism transcriptional repressor

Gene clsuter ID: MGYG000002353_1|CGC34
Gene ID: MGYG000002353_02343
Location and strand information: 2383494 - 2384453 (-)
Family: CBM42|GH43_26|GH43
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 6.1426
Protein molecular weight: 37014.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002353_1|CGC34
Gene ID: MGYG000002353_02344
Location and strand information: 2384465 - 2385976 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase 1
Protein isoelectric point: 5.5435
Protein molecular weight: 58121.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002353_1|CGC34
Gene ID: MGYG000002353_02345
Location and strand information: 2386086 - 2386241 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002353_1|CGC34
Gene ID: MGYG000002353_02346
Location and strand information: 2386407 - 2386562 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002353_1|CGC34
Gene ID: MGYG000002353_02347
Location and strand information: 2386568 - 2387431 (-)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002353_1|CGC34
Gene ID: MGYG000002353_02348
Location and strand information: 2387445 - 2388341 (-)
Family: 3.A.1.1.36
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002353_1|CGC34
Gene ID: MGYG000002353_02349
Location and strand information: 2388516 - 2389787 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: sn-glycerol-3-phosphate-binding periplasmic protein UgpB

Gene clsuter ID: MGYG000002353_1|CGC34
Gene ID: MGYG000002353_02350
Location and strand information: 2389777 - 2391294 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 4.9655
Protein molecular weight: 57394.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002353_02341	D-xylose transporter	TC	2380677	2382077	+	2.A.1.1.116
MGYG000002353_02342	Arabinose metabolism transcriptional repressor	TF	2382329	2383408	-	GntR
MGYG000002353_02343	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	2383494	2384453	-	CBM42\| GH43_26\| GH43
MGYG000002353_02344	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase 1	CAZyme	2384465	2385976	-	GH51
MGYG000002353_02345	hypothetical protein	null	2386086	2386241	+	No domain
MGYG000002353_02346	hypothetical protein	null	2386407	2386562	-	No domain
MGYG000002353_02347	L-arabinose transport system permease protein AraQ	TC	2386568	2387431	-	3.A.1.1.34
MGYG000002353_02348	Lactose transport system permease protein LacF	TC	2387445	2388341	-	3.A.1.1.36
MGYG000002353_02349	sn-glycerol-3-phosphate-binding periplasmic protein UgpB	STP	2388516	2389787	-	SBP_bac_1
MGYG000002353_02350	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	2389777	2391294	-	GH51
Protein ID	Protein Name	Type	Start	End	Strand	Signature